Proposal of possible pathway of fluorene biodegrada-tion by Citrobacter sp. FL5

Authors

  • Xuejiao Zhu Zhu
  • Minsheng Huang
  • Qiuzhuo Zhang
  • Varenyam Achal

DOI:

https://doi.org/10.18063/AEB.2016.01.009

Keywords:

Citrobacter sp, fluorene, dibenzofuran, degradation, metabolites, Gas Chromatography Mass Spectrometry (GC-MS)

Abstract

The biodegradation ability of Citrobacter sp. FL5 on fluorene was investigated in the present study. The bac-terial isolate was identified based on biochemical test, physiological and 16S rDNA sequence analysis. Fluorene biodegradation was studied in the liquid media at the initial concentration of 50 mg L−1 fluorene at different pH values (6, 7, 8 and 9) and temperatures (25, 30, 37 and 45°C). Citrobacter sp. FL5 showed maximum performance of fluorene degradation ability at pH 7 and 30°C where it degrades 98% fluorene in liquid media. Furthermore, the isolate degrades 97.5% and 96% of 100 and 150 mg L–1 fluorene respectively at 168 hrs. The possible metabolic pathway for fluorene biodegradation by Citrobacter sp. FL5 was deduced by identification of metabolites through Gas Chromatography Mass Spectrometry (GC-MS) technique. 5 types of metabolites that were detected and identified were dibenzofuran, 9-fluorenylmethanol, methyl benzilate, piperonylic acid and catechol. This study was the first to report and describe the ability of Citrobacter sp. in detail for degradation of higher fluorene concentrations at various pH and temperatures ranges.

References

Brenner R C, Magar V S, Ickes J A, et al. 2002, Characterization and FATE of PAH-contaminated sediments at the Wyckoff/Eagle Harbor Superfund Site. Environmental Science and Technology, vol.36: 2605–2613. http://dx.doi.org/10.1021/es011406u.

Antizar-Ladislao B, Lopez-Real J and Beck A J, 2006, Bioremediation of polycyclic aromatic hydrocarbons (PAH) in an aged coal-tar-contaminated soil using different in-vessel composting approaches. Journal of Hazardous Materials, vol.137(3): 1583–1588. http://dx.doi.org/10.1016/j.jhazmat.2006.04.056.

Grifoll M, Casellas M, Bayona J M, et al. 1992, Isolation and characterization of a fluorene-degrading bacterium: identification of ring oxidation and ring fission products. Applied and Environmental Microbiology

vol.58(9): 2910–2917.

Kawasaki S, Jin F and Takada T, 2011, High Dipsersion Power of Cardo-Typed Fluorene Moieties on Carbon Fillers. INTECH Open Access Publisher.

Monna L, Omori T and Kodama T, 1993, Microbial degradation of dibenzofuran, fluorene, and dibenzo-p- dioxin by Staphylococcus auriculans DBF63. Applied and Environmental Microbiology, vol.59: 285–289.

Trenz S P, Engesser K-H, Fischer P, et al. 1994, Degradation of fluorene by Brevibacterium sp. strain DPO 1361: a novel CC bond cleavage mechanism via 1, 10-dihydro-1, 10-dihydroxyfluoren-9-one. Journal of Bacteriology, vol.176(3): 789–795.

Grifoll M, Casellas M, Bayona J, et al. 1992, Isolation and characterization of a fluorene-degrading bacterium: identification of ring oxidation and ring fission products. Applied and Environmental Microbiology, vol.58(9):2910–2917.

Wattiau P, Bastiaens L, van Herwijnen R, et al. 2001, Fluorene degradation by Sphingomonas sp. LB126 proceeds through protocatechuic acid: a genetic analysis. Research in Microbiology, vol.152(10): 861–872. http://dx.doi.org/10.1016/S0923-2508(01)01269-4.

Finkelstein Z, Baskunov B, Golovlev E, et al. 2003, Fluorene transformation by bacteria of the genus Rhodococcus. Mikrobiologiia, vol.72(6): 660–665. http://dx.doi.org/10.1023/B:MICI.0000008365.53111.a4.

Casellas M, Grifoll M, Bayona J M, et al. 1997, New metabolites in the degradation of fluorene by Arthrobacter sp. strain F101. Applied and Environmental Microbiology, vol.63(3): 819–826.

Hidayati N V, Hilmi E, Haris A, et al. 2011, Fluorene removal by biosurfactants producing Bacillus megaterium. Waste and Biomass Valorization, vol.2: 415-422. http://dx.doi.org/10.1007/s12649-011-9085-3.

Krieg N R and Holt J C, (eds) 1984, Bergey's Manual of Systematic Bacteriology. Williams and Wilkins, Balti-more.

Achal V and Pan X, 2011, Characterization of urease and carbonic anhydrase producing bacteria and their role in calcite precipitation. Current Microbiology, vol.62(3): 894–902. http://dx.doi.org/10.1007/s00284-010-9801-4.

Deeb R and Alvarez-Cohen, 1999, Temperature effects and substrate interactions during the aerobic biotransformation of BTEX mixtures by toluene-enriched consortia and Rhodococcus rhodochrous. Biotechnology and Bioengineering, vol.62(5): 526–536.

Ukiwe L N and Egereonu U U, 2012, PH and sulphate mass: intensity factors in investigating sulphatedependent degradation of polycyclic aromatic hydrocarbons. Advances in Applied Science Research, vol.3(2):1132–1136.

Labana S, Singh O, Basu A, et al. 2005, A microcosm study on bioremediation of p-nitrophenol-contaminated soil using Arthrobacter protophormiae RKJ100. Applied Microbiology and Biotechnology, vol.68(3): 417–424. http://dx.doi.org/10.1007/s00253-005-1926-1.

Lin C, Gan L and Chen Z-L, 2010, Biodegradation of naphthalene by strain Bacillus fusiformis (BFN). Journal of Hazardous Materials, vol.182(1–3): 771–777. http://dx.doi.org/10.1016/j.jhazmat.2010.06.101.

Lee H, Jang Y, Choi Y-S, et al. 2014, Biotechnological procedures to select white rot fungi for the degradation of PAHs. Journal of Microbiological Methods, vol.97: 56–62. http://dx.doi.org/10.1016/j.mimet.2013.12.007.

Lau K, Tsang Y and Chiu S, 2003, Use of spent mushroom compost to bioremediate PAH-contaminated samples. Chemosphere, vol.52(9): 1539–1546. http://dx.doi.org/10.1016/S0045-6535(03)00493-4.

Rodrigues A C, Wuertz S, Brito A G, et al. 2005, Fluorene and phenanthrene uptake by Pseudomonas putida ATCC 17514: kinetics and physiological aspects. Biotechnology and Bioengineering, vol.90(3): 281–289. http://dx.doi.org/10.1002/bit.20377.

Ma J, Xu L and Jia L, 2012, Degradation of polycyclic aromatic hydrocarbons by Pseudomonas sp. JM2 isolated from active sewage sludge of chemical plant. Journal of Environmental Sciences, vol.24(12): 2141– 2148. http://dx.doi.org/10.1016/S1001-0742(11)61064-4.

Bressler D C and Fedorak P M, 2000, Bacterial metabolism of fluorene, dibenzofuran, dibenzothiophene, and carbazole. Candian Journal of Microbiology, vol.46(5): 397–409. http://dx.doi.org/10.1139/cjm-46-5-397.

Downloads

Published

2016-04-01

Issue

Section

Biodegradation and Bioremediation